plantecophys - Modelling and Analysis of Leaf Gas Exchange Data
Coupled leaf gas exchange model, A-Ci curve simulation and fitting, Ball-Berry stomatal conductance models, leaf energy balance using Penman-Monteith, Cowan-Farquhar optimization, humidity unit conversions. See Duursma (2015) <doi:10.1371/journal.pone.0143346>.
Last updated 4 years ago
6.38 score 159 scripts 400 downloadssmatr - (Standardised) Major Axis Estimation and Testing Routines
Methods for fitting bivariate lines in allometry using the major axis (MA) or standardised major axis (SMA), and for making inferences about such lines. The available methods of inference include confidence intervals and one-sample tests for slope and elevation, testing for a common slope or elevation amongst several allometric lines, constructing a confidence interval for a common slope or elevation, and testing for no shift along a common axis, amongst several samples. See Warton et al. 2012 <doi:10.1111/j.2041-210X.2011.00153.x> for methods description.
Last updated 7 years ago
5.21 score 1 stars 5 dependents 216 scripts 732 downloadsfitplc - Fit Hydraulic Vulnerability Curves
Fits Weibull or sigmoidal models to percent loss conductivity (plc) curves as a function of plant water potential, computes confidence intervals of parameter estimates and predictions with bootstrap or parametric methods, and provides convenient plotting methods.
Last updated 6 years ago
4.42 score 5 stars 15 scripts 170 downloadsMaeswrap - Wrapper functions for MAESTRA/MAESPA
A bundle of functions for modifying MAESTRA/MAESPA input files, reading output files, and visualizing the stand in 3D. Handy for running sensitivity analyses, scenario analyses, etc.
Last updated 5 years ago
3.92 score 3 stars 28 scripts 145 downloadslgrdata - Example Datasets for a Learning Guide to R
A largish collection of example datasets, including several classics. Many of these datasets are well suited for regression, classification, and visualization.
Last updated 6 years ago
3.11 score 26 scripts 143 downloads