Package: fitplc 1.3

fitplc: Fit Hydraulic Vulnerability Curves

Fits Weibull or sigmoidal models to percent loss conductivity (plc) curves as a function of plant water potential, computes confidence intervals of parameter estimates and predictions with bootstrap or parametric methods, and provides convenient plotting methods.

Authors:Remko Duursma [aut, cre]

fitplc_1.3.tar.gz
fitplc_1.3.zip(r-4.7)fitplc_1.3.zip(r-4.6)fitplc_1.3.zip(r-4.5)
fitplc_1.3.tgz(r-4.6-any)fitplc_1.3.tgz(r-4.5-any)
fitplc_1.3.tar.gz(r-4.7-any)fitplc_1.3.tar.gz(r-4.6-any)
fitplc_1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
fitplc/json (API)

# Install 'fitplc' in R:
install.packages('fitplc', repos = c('https://remkoduursma.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://bitbucket.org/remkoduursma/fitplc

Datasets:
  • stemvul - An example vulnerability curve

On CRAN:

Conda:

3.75 score 16 scripts 206 downloads 7 mentions 7 exports 69 dependencies

Last updated from:aabfe69fad. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64NOTE141
source / vignettesOK227
linux-release-x86_64NOTE131
macos-release-arm64NOTE107
macos-oldrel-arm64NOTE72
windows-develNOTE114
windows-releaseNOTE91
windows-oldrelNOTE76
wasm-releaseOK112

Exports:fitcondfitcondsfitplcfitplcsfsigmoidalfweibullgetPx

Dependencies:abindbackportsbootbroomcarcarDataclicolorspacecowplotcpp11DerivdoBydplyrfarverforecastFormulafracdiffgenericsggplot2gluegtableisobandlabelinglatticelifecyclelme4lmtestmagrittrMASSMatrixMatrixModelsmgcvmicrobenchmarkminqamodelrnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigpurrrquantregR6rbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackreformulasrlangS7scalesSparseMstringistringrsurvivaltibbletidyrtidyselecttimeDateurcautf8vctrsviridisLitewithrzoo

Readme and manuals

Help Manual

Help pageTopics
Fit a PLC curvefitcond fitconds fitplc fitplcs
Sigmoidal vulnerability curvefsigmoidal
Weibull vulnerability curvefweibull
Extract Px from fitted objectsgetPx getPx.default getPx.manyplcfit
Plot a fitted vulnerability curveplot.manyplcfit plot.plcfit
An example vulnerability curvestemvul