Package: fitplc 1.3

fitplc: Fit Hydraulic Vulnerability Curves

Fits Weibull or sigmoidal models to percent loss conductivity (plc) curves as a function of plant water potential, computes confidence intervals of parameter estimates and predictions with bootstrap or parametric methods, and provides convenient plotting methods.

Authors:Remko Duursma [aut, cre]

fitplc_1.3.tar.gz
fitplc_1.3.zip(r-4.7-any)fitplc_1.3.zip(r-4.6-any)fitplc_1.3.zip(r-4.5-any)
fitplc_1.3.tgz(r-4.6-any)fitplc_1.3.tgz(r-4.5-any)
fitplc_1.3.tar.gz(r-4.7-any)fitplc_1.3.tar.gz(r-4.6-any)
fitplc_1.3.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
fitplc/json (API)

# Install 'fitplc' in R:
install.packages('fitplc', repos = c('https://remkoduursma.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://bitbucket.org/remkoduursma/fitplc

Datasets:
  • stemvul - An example vulnerability curve

On CRAN:

Conda:

3.54 score 311 downloads 7 mentions 7 exports 68 dependencies

Last updated from:aabfe69fad. Checks:7 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-develNOTE128
source / vignettesOK202
linux-releaseNOTE137
macos-releaseNOTE162
macos-oldrelNOTE201
windows-develNOTE97
windows-releaseNOTE88
windows-oldrelNOTE67
wasm-releaseOK103

Exports:fitcondfitcondsfitplcfitplcsfsigmoidalfweibullgetPx

Dependencies:abindbackportsbootbroomcarcarDataclicolorspacecowplotcpp11DerivdoBydplyrfarverforecastFormulafracdiffgenericsggplot2gluegtableisobandlabelinglatticelifecyclelme4lmtestmagrittrMASSMatrixMatrixModelsmgcvminqamodelrnlmenloptrnnetnumDerivpbkrtestpillarpkgconfigpurrrquantregR6rbibutilsRColorBrewerRcppRcppArmadilloRcppEigenRdpackreformulasrlangS7scalesSparseMstringistringrsurvivaltibbletidyrtidyselecttimeDateurcautf8vctrsviridisLitewithrzoo

Readme and manuals

Help Manual

Help pageTopics
Fit a PLC curvefitcond fitconds fitplc fitplcs
Sigmoidal vulnerability curvefsigmoidal
Weibull vulnerability curvefweibull
Extract Px from fitted objectsgetPx getPx.default getPx.manyplcfit
Plot a fitted vulnerability curveplot.manyplcfit plot.plcfit
An example vulnerability curvestemvul